Gene detail information of Glyur012456s00046225 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61910.4 | 1.00E-21 | DCD (Development and Cell Death) domain protein |
| NR | KHN16890.1 | 1.46E-33 | Protein BONZAI 1, partial [Glycine soja] |
| Swissprot | tr|Q941L3|BON1_ARATH | 1.00E-24 | Protein BONZAI 1 |
| trEMBL | tr|I1KP23|I1KP23_SOYBN | 5.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G01020.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold12456 | 49 | 645 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur012456s00046225.1 | PF00168.25 | C2 | 25 | 99 | 0.00029 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.443 |
| SRR1783600 | control | 2.449 |
| SRR1783602 | moderate drought stress | 2.827 |
| SRR1811619 | moderate drought stress | 2.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.747 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.770 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.437 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.936 |
| SRR9715740 | Leaf | 7.650 |
| SRR9715741 | Leaf | 28.322 |
| SRR9715739 | Root | 1.614 |
| SRR9715742 | Root | 13.030 |
| SRR9715743 | Root | 11.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.944 |
| SRR8400027 | Control - Root | 23.972 |