Gene detail information of Glyur012420s00047244 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34070.1 | 8.00E-22 | TRICHOME BIREFRINGENCE-LIKE 37 |
| NR | XP_004485883.1 | 4.85E-48 | PREDICTED: uncharacterized protein LOC101498973 [Cicer arietinum] |
| Swissprot | tr|O22960|TBL37_ARATH | 2.00E-25 | Protein trichome birefringence-like 37 |
| trEMBL | tr|I1KLT0|I1KLT0_SOYBN | 9.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G32630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold12420 | 54 | 671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur012420s00047244.1 | PF14416.1 | PMR5N | 45 | 94 | 7.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 71.947 |
| SRR1783600 | control | 72.369 |
| SRR1783602 | moderate drought stress | 52.989 |
| SRR1811619 | moderate drought stress | 53.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.035 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.811 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.978 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.319 |
| SRR2868004 | Drought Stress (root) | 19.821 |
| SRR2967015 | Control (root) | 15.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.379 |
| SRR9715740 | Leaf | 29.767 |
| SRR9715741 | Leaf | 40.372 |
| SRR9715739 | Root | 4.611 |
| SRR9715742 | Root | 11.546 |
| SRR9715743 | Root | 7.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.250 |
| SRR8749028 | MeJA induced 9h | 27.386 |
| SRR8749029 | MeJA induced 9h | 21.967 |
| SRR8749030 | Uninduced | 1.605 |
| SRR8749031 | Uninduced | 1.374 |
| SRR8749032 | Uninduced | 8.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.321 |
| SRR8400027 | Control - Root | 39.428 |