Gene detail information of Glyur011183s00047581 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH41503.1 | 1.46E-62 | CC-NBS-LRR resistance protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VJA1|A0A072VJA1_MEDTR | 5.00E-63 | CC-NBS-LRR resistance protein, putative {ECO:0000313|EMBL:KEH41503.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold11183 | 938 | 1324 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.781 |
| SRR1783600 | control | 10.339 |
| SRR1783602 | moderate drought stress | 8.436 |
| SRR1811619 | moderate drought stress | 7.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.453 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.396 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.346 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.233 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.821 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.922 |
| SRR2868004 | Drought Stress (root) | 7.505 |
| SRR2967015 | Control (root) | 6.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.977 |
| SRR9715740 | Leaf | 0.502 |
| SRR9715741 | Leaf | 1.482 |
| SRR9715739 | Root | 0.030 |
| SRR9715742 | Root | 1.310 |
| SRR9715743 | Root | 0.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.319 |
| SRR8400027 | Control - Root | 0.196 |