Gene detail information of Glyur011045s00047670 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27220.1 | 4.00E-12 | NB-ARC domain-containing disease resistance protein |
| NR | KEH38444.1 | 7.66E-156 | CC-NBS-LRR resistance protein [Medicago truncatula] |
| Swissprot | tr|Q9T048|DRL27_ARATH | 4.00E-15 | Disease resistance protein At4g27190 |
| trEMBL | tr|A0A072V8V1|A0A072V8V1_MEDTR | 3.00E-156 | CC-NBS-LRR resistance protein {ECO:0000313|EMBL:KEH38444.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold11045 | 76 | 999 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur011045s00047670.1 | PF12799.2 | LRR_4 | 132 | 164 | 2.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.405 |
| SRR1783600 | control | 1.116 |
| SRR1783602 | moderate drought stress | 1.335 |
| SRR1811619 | moderate drought stress | 1.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.738 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.464 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.930 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.151 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.129 |
| SRR2868004 | Drought Stress (root) | 20.228 |
| SRR2967015 | Control (root) | 22.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.323 |
| SRR9715740 | Leaf | 0.069 |
| SRR9715741 | Leaf | 0.488 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.953 |
| SRR9715743 | Root | 1.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.920 |
| SRR8749028 | MeJA induced 9h | 12.515 |
| SRR8749029 | MeJA induced 9h | 1.738 |
| SRR8749030 | Uninduced | 1.257 |
| SRR8749031 | Uninduced | 0.158 |
| SRR8749032 | Uninduced | 0.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.429 |
| SRR8400027 | Control - Root | 2.764 |