Gene detail information of Glyur010992s00046802 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13950.1 | 7.00E-06 | |
| NR | XP_004510422.1 | 3.48E-17 | PREDICTED: uncharacterized protein LOC101494327 [Cicer arietinum] |
| trEMBL | tr|I3SKH4|I3SKH4_LOTJA | 1.00E-16 | Uncharacterized protein {ECO:0000313|EMBL:AFK40766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10992 | 840 | 1351 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur010992s00046802.1 | PF13962.1 | PGG | 20 | 101 | 4.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.658 |
| SRR1783600 | control | 19.092 |
| SRR1783602 | moderate drought stress | 2.864 |
| SRR1811619 | moderate drought stress | 3.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.106 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.580 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.241 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 76.779 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 70.700 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.343 |
| SRR2868004 | Drought Stress (root) | 20.337 |
| SRR2967015 | Control (root) | 23.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.608 |
| SRR9715740 | Leaf | 3.957 |
| SRR9715741 | Leaf | 86.448 |
| SRR9715739 | Root | 58.307 |
| SRR9715742 | Root | 22.832 |
| SRR9715743 | Root | 27.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.166 |
| SRR8749028 | MeJA induced 9h | 40.047 |
| SRR8749029 | MeJA induced 9h | 27.883 |
| SRR8749030 | Uninduced | 203.608 |
| SRR8749031 | Uninduced | 420.922 |
| SRR8749032 | Uninduced | 162.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.868 |
| SRR8400027 | Control - Root | 43.726 |