Gene detail information of Glyur010670s00044960 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52950.1 | 8.00E-09 | Nucleic acid-binding, OB-fold-like protein |
| NR | XP_006601671.1 | 2.13E-58 | PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like [Glycine max] |
| trEMBL | tr|K7KDS7|K7KDS7_SOYBN | 2.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G19817.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10670 | 46 | 1468 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur010670s00044960.1 | PF02721.9 | DUF223 | 1 | 95 | 5.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.036 |
| SRR1783600 | control | 0.018 |
| SRR1783602 | moderate drought stress | 0.133 |
| SRR1811619 | moderate drought stress | 0.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.153 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.622 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.231 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.169 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.840 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.173 |
| SRR9715740 | Leaf | 1.631 |
| SRR9715741 | Leaf | 3.066 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 3.619 |
| SRR9715743 | Root | 3.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.111 |
| SRR8749028 | MeJA induced 9h | 0.069 |
| SRR8749029 | MeJA induced 9h | 0.123 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.119 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.492 |
| SRR8400027 | Control - Root | 2.449 |