Gene detail information of Glyur010636s00047534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36690.1 | 5.00E-11 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | AFK44098.1 | 2.81E-52 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9M547|FLS_EUSER | 5.00E-12 | Flavonol synthase/flavanone 3-hydroxylase |
| trEMBL | tr|I3SV06|I3SV06_LOTJA | 1.00E-52 | Uncharacterized protein {ECO:0000313|EMBL:AFK44098.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10636 | 199 | 588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur010636s00047534.1 | PF14226.1 | DIOX_N | 43 | 112 | 7.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.807 |
| SRR1783600 | control | 2.029 |
| SRR1783602 | moderate drought stress | 4.221 |
| SRR1811619 | moderate drought stress | 5.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.785 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.333 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.449 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.838 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.537 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.780 |
| SRR2868004 | Drought Stress (root) | 0.210 |
| SRR2967015 | Control (root) | 0.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.349 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.335 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.474 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.078 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.566 |
| SRR8400027 | Control - Root | 0.886 |