Gene detail information of Glyur010522s00047821 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37850.1 | 2.00E-15 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003534493.1 | 2.70E-50 | PREDICTED: transcription factor bHLH25-like [Glycine max] |
| Swissprot | tr|Q1PF16|BH019_ARATH | 1.00E-12 | Transcription factor bHLH19 |
| trEMBL | tr|I1L667|I1L667_SOYBN | 1.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G38250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10522 | 1010 | 1375 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.462 |
| SRR1783600 | control | 21.833 |
| SRR1783602 | moderate drought stress | 17.183 |
| SRR1811619 | moderate drought stress | 17.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.009 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.648 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.136 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.006 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.002 |
| SRR2868004 | Drought Stress (root) | 20.263 |
| SRR2967015 | Control (root) | 14.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.633 |
| SRR9715740 | Leaf | 0.904 |
| SRR9715741 | Leaf | 1.973 |
| SRR9715739 | Root | 1.003 |
| SRR9715742 | Root | 19.154 |
| SRR9715743 | Root | 13.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.023 |
| SRR8400027 | Control - Root | 6.462 |