Gene detail information of Glyur010447s00046922 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004498237.1 | 9.45E-14 | PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072VFQ4|A0A072VFQ4_MEDTR | 5.00E-14 | RNA-directed RNA polymerase {ECO:0000313|EMBL:KEH40642.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10447 | 2 | 365 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.446 |
| SRR1783600 | control | 1.888 |
| SRR1783602 | moderate drought stress | 1.314 |
| SRR1811619 | moderate drought stress | 1.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.109 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.242 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.955 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.909 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.738 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.551 |
| SRR2868004 | Drought Stress (root) | 15.051 |
| SRR2967015 | Control (root) | 15.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.617 |
| SRR9715740 | Leaf | 1.080 |
| SRR9715741 | Leaf | 1.291 |
| SRR9715739 | Root | 1.557 |
| SRR9715742 | Root | 3.852 |
| SRR9715743 | Root | 2.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.453 |
| SRR8749028 | MeJA induced 9h | 0.817 |
| SRR8749029 | MeJA induced 9h | 1.585 |
| SRR8749030 | Uninduced | 0.529 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.200 |
| SRR8400027 | Control - Root | 2.893 |