Gene detail information of Glyur010278s00047507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25300.1 | 1.00E-11 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_003524845.1 | 4.95E-28 | PREDICTED: protein SRG1-like [Glycine max] |
| Swissprot | tr|D4N502|DIOX3_PAPSO | 9.00E-18 | Codeine O-demethylase |
| trEMBL | tr|I1K3B8|I1K3B8_SOYBN | 2.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold10278 | 14 | 331 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur010278s00047507.1 | PF14226.1 | DIOX_N | 47 | 85 | 2.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 485.569 |
| SRR1783600 | control | 501.237 |
| SRR1783602 | moderate drought stress | 823.942 |
| SRR1811619 | moderate drought stress | 834.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.585 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.655 |
| SRR2868004 | Drought Stress (root) | 306.322 |
| SRR2967015 | Control (root) | 219.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.158 |
| SRR9715739 | Root | 127.159 |
| SRR9715742 | Root | 90.711 |
| SRR9715743 | Root | 84.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.313 |
| SRR8749028 | MeJA induced 9h | 5.724 |
| SRR8749029 | MeJA induced 9h | 3.317 |
| SRR8749030 | Uninduced | 5.571 |
| SRR8749031 | Uninduced | 12.878 |
| SRR8749032 | Uninduced | 5.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 383.712 |
| SRR8400027 | Control - Root | 269.668 |