Gene detail information of Glyur009861s00045780 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72840.1 | 5.00E-23 | Disease resistance protein (TIR-NBS-LRR class) |
| NR | XP_003539652.1 | 1.72E-49 | PREDICTED: TMV resistance protein N-like [Glycine max] |
| Swissprot | tr|Q9FL92|WRK16_ARATH | 6.00E-16 | Probable WRKY transcription factor 16 |
| trEMBL | tr|K7LWN5|K7LWN5_SOYBN | 1.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G36841.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09861 | 520 | 1500 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009861s00045780.1 | PF00931.17 | NB-ARC | 45 | 103 | 1.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.996 |
| SRR1783600 | control | 1.173 |
| SRR1783602 | moderate drought stress | 0.434 |
| SRR1811619 | moderate drought stress | 0.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.503 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.286 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.134 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.790 |
| SRR2868004 | Drought Stress (root) | 31.689 |
| SRR2967015 | Control (root) | 12.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.178 |
| SRR9715740 | Leaf | 0.216 |
| SRR9715741 | Leaf | 1.117 |
| SRR9715739 | Root | 2.483 |
| SRR9715742 | Root | 12.149 |
| SRR9715743 | Root | 11.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.994 |
| SRR8749028 | MeJA induced 9h | 41.209 |
| SRR8749029 | MeJA induced 9h | 21.628 |
| SRR8749030 | Uninduced | 16.995 |
| SRR8749031 | Uninduced | 20.044 |
| SRR8749032 | Uninduced | 9.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.015 |
| SRR8400027 | Control - Root | 9.711 |