Gene detail information of Glyur009838s00047893 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07040.1 | 1.00E-21 | NB-ARC domain-containing disease resistance protein |
| NR | XP_004499780.1 | 2.26E-148 | PREDICTED: disease resistance protein RPM1-like [Cicer arietinum] |
| Swissprot | tr|Q8W4J9|RPP8_ARATH | 4.00E-17 | Disease resistance protein RPP8 |
| trEMBL | tr|A0A072UTM5|A0A072UTM5_MEDTR | 2.00E-138 | NBS-LRR type disease resistance protein {ECO:0000313|EMBL:KEH32977.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09838 | 824 | 1723 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.085 |
| SRR1783600 | control | 2.076 |
| SRR1783602 | moderate drought stress | 2.793 |
| SRR1811619 | moderate drought stress | 2.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.640 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.521 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.072 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.328 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.545 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.037 |
| SRR2868004 | Drought Stress (root) | 5.818 |
| SRR2967015 | Control (root) | 5.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.150 |
| SRR9715740 | Leaf | 10.562 |
| SRR9715741 | Leaf | 17.488 |
| SRR9715739 | Root | 0.497 |
| SRR9715742 | Root | 3.511 |
| SRR9715743 | Root | 2.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.998 |
| SRR8749028 | MeJA induced 9h | 11.926 |
| SRR8749029 | MeJA induced 9h | 14.988 |
| SRR8749030 | Uninduced | 12.670 |
| SRR8749031 | Uninduced | 8.836 |
| SRR8749032 | Uninduced | 7.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.176 |
| SRR8400027 | Control - Root | 5.200 |