Gene detail information of Glyur009836s00045749 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47790.1 | 5.00E-28 | ABC2 homolog 7 |
| NR | XP_006579534.1 | 1.77E-71 | PREDICTED: ABC transporter A family member 7-like isoform X2 [Glycine max] |
| Swissprot | tr|Q8LPK0|AB8A_ARATH | 5.00E-43 | ABC transporter A family member 8 |
| trEMBL | tr|I1JZR0|I1JZR0_SOYBN | 7.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G01230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09836 | 275 | 1322 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.026 |
| SRR1783600 | control | 11.849 |
| SRR1783602 | moderate drought stress | 8.754 |
| SRR1811619 | moderate drought stress | 8.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.437 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.219 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.901 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.451 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.207 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.264 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.899 |
| SRR2868004 | Drought Stress (root) | 10.683 |
| SRR2967015 | Control (root) | 15.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.527 |
| SRR9715740 | Leaf | 5.411 |
| SRR9715741 | Leaf | 3.880 |
| SRR9715739 | Root | 5.558 |
| SRR9715742 | Root | 13.174 |
| SRR9715743 | Root | 9.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.437 |
| SRR8749028 | MeJA induced 9h | 3.785 |
| SRR8749029 | MeJA induced 9h | 0.844 |
| SRR8749030 | Uninduced | 0.730 |
| SRR8749031 | Uninduced | 0.477 |
| SRR8749032 | Uninduced | 0.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.429 |
| SRR8400027 | Control - Root | 18.033 |