Gene detail information of Glyur009610s00047841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13480.1 | 4.00E-26 | Protein of unknown function (DUF1262) |
| NR | XP_004504512.1 | 1.41E-71 | PREDICTED: uncharacterized protein LOC101515133 [Cicer arietinum] |
| trEMBL | tr|G7K480|G7K480_MEDTR | 8.00E-72 | DUF1262 family protein {ECO:0000313|EMBL:AES96325.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09610 | 38 | 505 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.155 |
| SRR1783600 | control | 0.064 |
| SRR1783602 | moderate drought stress | 0.401 |
| SRR1811619 | moderate drought stress | 0.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.753 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.236 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.597 |
| SRR2868004 | Drought Stress (root) | 33.591 |
| SRR2967015 | Control (root) | 12.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.734 |
| SRR9715740 | Leaf | 6.765 |
| SRR9715741 | Leaf | 6.298 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.882 |
| SRR8749028 | MeJA induced 9h | 128.179 |
| SRR8749029 | MeJA induced 9h | 112.224 |
| SRR8749030 | Uninduced | 184.664 |
| SRR8749031 | Uninduced | 764.361 |
| SRR8749032 | Uninduced | 356.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.460 |
| SRR8400027 | Control - Root | 2.617 |