Gene detail information of Glyur009557s00047625 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ABV32454.1 | 9.42E-108 | sieve element occlusion by forisome 1 [Vicia faba] |
| trEMBL | tr|A8C977|A8C977_VICFA | 4.00E-108 | Sieve element occlusion by forisome 1 {ECO:0000313|EMBL:ABV32454.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09557 | 48 | 581 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009557s00047625.1 | PF14577.1 | SEO_C | 2 | 168 | 2.20E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.425 |
| SRR1783600 | control | 7.516 |
| SRR1783602 | moderate drought stress | 9.038 |
| SRR1811619 | moderate drought stress | 9.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.936 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.541 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.665 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.259 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 77.642 |
| SRR2868004 | Drought Stress (root) | 59.883 |
| SRR2967015 | Control (root) | 81.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.118 |
| SRR9715740 | Leaf | 0.199 |
| SRR9715741 | Leaf | 2.156 |
| SRR9715739 | Root | 1.855 |
| SRR9715742 | Root | 13.567 |
| SRR9715743 | Root | 10.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.749 |
| SRR8400027 | Control - Root | 21.672 |