Gene detail information of Glyur009388s00046775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006586177.1 | 1.05E-25 | PREDICTED: vacuolar cation/proton exchanger 5-like isoform X5 [Glycine max] |
| trEMBL | tr|K7LVD4|K7LVD4_SOYBN | 1.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G28951.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09388 | 1017 | 1892 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.658 |
| SRR1783600 | control | 0.644 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.152 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.176 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.224 |
| SRR9715740 | Leaf | 0.588 |
| SRR9715741 | Leaf | 0.195 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.424 |
| SRR8749028 | MeJA induced 9h | 28.341 |
| SRR8749029 | MeJA induced 9h | 14.554 |
| SRR8749030 | Uninduced | 10.221 |
| SRR8749031 | Uninduced | 24.026 |
| SRR8749032 | Uninduced | 10.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |