Gene detail information of Glyur009372s00045562 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN57119.1 | 6.64E-15 | hypothetical protein Csa_3G154400 [Cucumis sativus] |
| trEMBL | tr|A0A0A0L7X6|A0A0A0L7X6_CUCSA | 2.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:KGN57119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09372 | 357 | 794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.295 |
| SRR1783600 | control | 27.419 |
| SRR1783602 | moderate drought stress | 27.640 |
| SRR1811619 | moderate drought stress | 27.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.885 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.487 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.797 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 95.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 102.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.725 |
| SRR2868004 | Drought Stress (root) | 7.081 |
| SRR2967015 | Control (root) | 10.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.366 |
| SRR9715740 | Leaf | 1.243 |
| SRR9715741 | Leaf | 3.753 |
| SRR9715739 | Root | 15.267 |
| SRR9715742 | Root | 23.000 |
| SRR9715743 | Root | 18.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.544 |
| SRR8749028 | MeJA induced 9h | 23.974 |
| SRR8749029 | MeJA induced 9h | 27.411 |
| SRR8749030 | Uninduced | 26.254 |
| SRR8749031 | Uninduced | 2.734 |
| SRR8749032 | Uninduced | 6.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.833 |
| SRR8400027 | Control - Root | 9.173 |