Gene detail information of Glyur009372s00045561 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06890.1 | 8.00E-21 | |
| NR | XP_007035612.1 | 1.44E-43 | Uncharacterized protein TCM_021224 [Theobroma cacao] |
| trEMBL | tr|A0A061EPD5|A0A061EPD5_THECC | 5.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:EOY06538.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09372 | 353 | 712 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.409 |
| SRR1783600 | control | 25.848 |
| SRR1783602 | moderate drought stress | 25.702 |
| SRR1811619 | moderate drought stress | 25.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 70.165 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 79.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.930 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 134.688 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 118.609 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.329 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.460 |
| SRR2868004 | Drought Stress (root) | 25.110 |
| SRR2967015 | Control (root) | 46.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.108 |
| SRR9715740 | Leaf | 10.123 |
| SRR9715741 | Leaf | 27.212 |
| SRR9715739 | Root | 89.175 |
| SRR9715742 | Root | 112.936 |
| SRR9715743 | Root | 93.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.328 |
| SRR8749028 | MeJA induced 9h | 12.508 |
| SRR8749029 | MeJA induced 9h | 11.636 |
| SRR8749030 | Uninduced | 8.060 |
| SRR8749031 | Uninduced | 2.273 |
| SRR8749032 | Uninduced | 4.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.773 |
| SRR8400027 | Control - Root | 35.698 |