Gene detail information of Glyur009318s00046072 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75900.1 | 1.00E-86 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | ACU24478.1 | 2.13E-146 | unknown [Glycine max] |
| COG | YP_007143513.1 | 1.00E-11 | G-D-S-L family lipolytic protein [Crinalium epipsammum PCC 9333] |
| Swissprot | tr|Q94CH6|EXL3_ARATH | 7.00E-106 | GDSL esterase/lipase EXL3 (Precursor) |
| trEMBL | tr|K7KSL6|K7KSL6_SOYBN | 6.00E-149 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G02530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09318 | 34 | 1748 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009318s00046072.1 | PF00657.17 | Lipase_GDSL | 74 | 283 | 5.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.589 |
| SRR1783600 | control | 0.593 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.124 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.155 |
| SRR2868004 | Drought Stress (root) | 0.209 |
| SRR2967015 | Control (root) | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.815 |
| SRR9715740 | Leaf | 0.153 |
| SRR9715741 | Leaf | 1.056 |
| SRR9715739 | Root | 0.394 |
| SRR9715742 | Root | 2.537 |
| SRR9715743 | Root | 1.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.124 |
| SRR8400027 | Control - Root | 11.124 |