Gene detail information of Glyur009277s00047850 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18150.1 | 2.00E-10 | Methyltransferase-related protein |
| NR | XP_003618966.1 | 8.72E-23 | hypothetical protein MTR_6g029390 [Medicago truncatula] |
| trEMBL | tr|G7KPM7|G7KPM7_MEDTR | 3.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AFK49482.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09277 | 1275 | 1460 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.495 |
| SRR1783600 | control | 3.827 |
| SRR1783602 | moderate drought stress | 3.742 |
| SRR1811619 | moderate drought stress | 3.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.615 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.137 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.805 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.611 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.342 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.915 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.337 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.383 |
| SRR2868004 | Drought Stress (root) | 14.558 |
| SRR2967015 | Control (root) | 12.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 73.693 |
| SRR9715740 | Leaf | 52.196 |
| SRR9715741 | Leaf | 115.158 |
| SRR9715739 | Root | 15.155 |
| SRR9715742 | Root | 20.373 |
| SRR9715743 | Root | 19.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 61.077 |
| SRR8749028 | MeJA induced 9h | 94.278 |
| SRR8749029 | MeJA induced 9h | 88.312 |
| SRR8749030 | Uninduced | 194.009 |
| SRR8749031 | Uninduced | 136.542 |
| SRR8749032 | Uninduced | 111.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.865 |
| SRR8400027 | Control - Root | 23.277 |