Gene detail information of Glyur009254s00047050 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40460.1 | 2.00E-50 | Major facilitator superfamily protein |
| NR | XP_003552142.1 | 1.21E-66 | PREDICTED: probable peptide/nitrate transporter At2g40460-like [Glycine max] |
| COG | YP_678209.1 | 5.00E-09 | oligopeptide transporter [Cytophaga hutchinsonii ATCC 33406] |
| Swissprot | tr|Q8VZR7|PTR30_ARATH | 3.00E-59 | Protein NRT1/ PTR FAMILY 5.1 |
| trEMBL | tr|I1MYX1|I1MYX1_SOYBN | 5.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G02510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09254 | 767 | 1743 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.055 |
| SRR1783602 | moderate drought stress | 0.113 |
| SRR1811619 | moderate drought stress | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.652 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.782 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.429 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.581 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.144 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.332 |
| SRR2868004 | Drought Stress (root) | 0.433 |
| SRR2967015 | Control (root) | 0.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.290 |
| SRR9715740 | Leaf | 3.794 |
| SRR9715741 | Leaf | 2.386 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.088 |
| SRR9715743 | Root | 1.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.101 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.102 |
| SRR8749032 | Uninduced | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.042 |
| SRR8400027 | Control - Root | 0.536 |