Gene detail information of Glyur009152s00045171 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17310.2 | 4.00E-50 | UDP-glucose pyrophosphorylase 2 |
| NR | KHN41034.1 | 7.40E-76 | UTP--glucose-1-phosphate uridylyltransferase [Glycine soja] |
| COG | YP_006980131.1 | 3.00E-18 | UTP--glucose-1-phosphate uridylyltransferase [Propionibacterium acidipropionici ATCC 4875] |
| Swissprot | tr|Q9LKG7|UGPA_ASTPN | 4.00E-74 | UTP--glucose-1-phosphate uridylyltransferase |
| trEMBL | tr|G7J7Y7|G7J7Y7_MEDTR | 6.00E-76 | UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AES70881.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09152 | 104 | 1629 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00963 | UGP2, galU, galF | EC:2.7.7.9 | Pentose and glucuronate interconversions | map00040 |
| Galactose metabolism | map00052 | |||
| Starch and sucrose metabolism | map00500 | |||
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009152s00045171.1 | PF01704.13 | UDPGP | 1 | 136 | 4.60E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.354 |
| SRR1783600 | control | 6.711 |
| SRR1783602 | moderate drought stress | 13.704 |
| SRR1811619 | moderate drought stress | 13.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.143 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.098 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.217 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.754 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.612 |
| SRR2868004 | Drought Stress (root) | 8.524 |
| SRR2967015 | Control (root) | 5.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.194 |
| SRR9715740 | Leaf | 1.549 |
| SRR9715741 | Leaf | 4.345 |
| SRR9715739 | Root | 1.052 |
| SRR9715742 | Root | 4.642 |
| SRR9715743 | Root | 5.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.130 |
| SRR8749028 | MeJA induced 9h | 0.814 |
| SRR8749029 | MeJA induced 9h | 0.497 |
| SRR8749030 | Uninduced | 0.337 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.681 |
| SRR8400027 | Control - Root | 36.382 |