Gene detail information of Glyur009124s00046036 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54000.1 | 2.00E-14 | |
| NR | KHN42914.1 | 2.35E-99 | hypothetical protein glysoja_045139 [Glycine soja] |
| trEMBL | tr|V7B7J8|V7B7J8_PHAVU | 3.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW12446.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09124 | 3 | 1336 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.749 |
| SRR1783600 | control | 20.541 |
| SRR1783602 | moderate drought stress | 13.512 |
| SRR1811619 | moderate drought stress | 13.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.475 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.216 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.225 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.864 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.269 |
| SRR2868004 | Drought Stress (root) | 30.020 |
| SRR2967015 | Control (root) | 40.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.974 |
| SRR9715740 | Leaf | 8.248 |
| SRR9715741 | Leaf | 12.473 |
| SRR9715739 | Root | 32.849 |
| SRR9715742 | Root | 69.166 |
| SRR9715743 | Root | 62.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 267.844 |
| SRR8749028 | MeJA induced 9h | 85.637 |
| SRR8749029 | MeJA induced 9h | 69.737 |
| SRR8749030 | Uninduced | 25.218 |
| SRR8749031 | Uninduced | 1.832 |
| SRR8749032 | Uninduced | 6.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.014 |
| SRR8400027 | Control - Root | 40.026 |