Gene detail information of Glyur009107s00046187


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75840.11.00E-52RAC-like GTP binding protein 5
NRO04369.11.28E-65RecName: Full=Rac-like GTP-binding protein RAC1; Flags: Precursor [Lotus japonicus]
COGYP_004579062.12.00E-07small GTP-binding protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|O04369|RAC1_LOTJA6.00E-68Rac-like GTP-binding protein RAC1 (Precursor)
trEMBLtr|I3T4P6|I3T4P6_LOTJA5.00E-66Uncharacterized protein {ECO:0000313|EMBL:AFK47488.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold091078092041+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0007165  signal transduction

GO:0007264  small GTPase mediated signal transduction

GO:0015031  protein transport


cellular_component

GO:0005622  intracellular

GO:0016020  membrane


molecular_function

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur009107s00046187.1PF00071.17Ras8981.20E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.243
SRR1783600control17.884
SRR1783602moderate drought stress12.123
SRR1811619moderate drought stress11.564

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.464
DRR006520Root Summer glycyrrhizin high producing strain24.671
DRR006521Root Winter glycyrrhizin high producing strain4.294
DRR006522Root Winter glycyrrhizin high producing strain4.091
DRR006523Root Summer glycyrrhizin low producing strain16.713
DRR006524Root Summer glycyrrhizin low producing strain17.932
DRR006525Leaf Summer glycyrrhizin high producing strain8.044
DRR006526Leaf Summer glycyrrhizin high producing strain7.380

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)16.264
SRR2868004Drought Stress (root)12.922
SRR2967015Control (root)16.928

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf6.107
SRR9715740Leaf3.527
SRR9715741Leaf3.670
SRR9715739Root11.877
SRR9715742Root10.691
SRR9715743Root9.957

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.387
SRR8749028MeJA induced 9h9.014
SRR8749029MeJA induced 9h5.054
SRR8749030Uninduced2.286
SRR8749031Uninduced1.117
SRR8749032Uninduced3.638

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root21.719
SRR8400027Control - Root22.334

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved