Gene detail information of Glyur009058s00045455 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55060.1 | 6.00E-07 | |
| NR | XP_003617587.1 | 1.30E-09 | Rab3 GTPase-activating protein catalytic subunit [Medicago truncatula] |
| trEMBL | tr|G7K3L4|G7K3L4_MEDTR | 5.00E-10 | Rab3 GTPase-activating protein catalytic subunit {ECO:0000313|EMBL:AET00546.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09058 | 120 | 1240 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.598 |
| SRR1783600 | control | 0.681 |
| SRR1783602 | moderate drought stress | 0.273 |
| SRR1811619 | moderate drought stress | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.026 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.559 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.326 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.238 |
| SRR2868004 | Drought Stress (root) | 4.625 |
| SRR2967015 | Control (root) | 4.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.542 |
| SRR9715740 | Leaf | 0.376 |
| SRR9715741 | Leaf | 1.043 |
| SRR9715739 | Root | 0.129 |
| SRR9715742 | Root | 0.461 |
| SRR9715743 | Root | 0.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.506 |
| SRR8749028 | MeJA induced 9h | 1.670 |
| SRR8749029 | MeJA induced 9h | 1.343 |
| SRR8749030 | Uninduced | 0.421 |
| SRR8749031 | Uninduced | 0.477 |
| SRR8749032 | Uninduced | 0.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.558 |
| SRR8400027 | Control - Root | 6.739 |