Gene detail information of Glyur009052s00046945 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07570.1 | 3.00E-42 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
| NR | XP_004510729.1 | 6.49E-99 | PREDICTED: uncharacterized protein LOC101514851 [Cicer arietinum] |
| Swissprot | tr|Q0WRW8|B561K_ARATH | 2.00E-63 | Cytochrome b561 and DOMON domain-containing protein At3g07570 (Precursor) |
| trEMBL | tr|G7ZYU6|G7ZYU6_MEDTR | 7.00E-98 | Ferric-chelate reductase {ECO:0000313|EMBL:AES84384.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold09052 | 522 | 1573 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur009052s00046945.1 | PF03188.11 | Cytochrom_B561 | 68 | 156 | 3.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.633 |
| SRR1783600 | control | 0.595 |
| SRR1783602 | moderate drought stress | 0.364 |
| SRR1811619 | moderate drought stress | 0.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.905 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.199 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.386 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.291 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.375 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.556 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.329 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.693 |
| SRR2868004 | Drought Stress (root) | 0.527 |
| SRR2967015 | Control (root) | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.796 |
| SRR9715740 | Leaf | 0.470 |
| SRR9715741 | Leaf | 0.603 |
| SRR9715739 | Root | 0.646 |
| SRR9715742 | Root | 0.992 |
| SRR9715743 | Root | 1.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.027 |
| SRR8749032 | Uninduced | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.340 |
| SRR8400027 | Control - Root | 2.803 |