Gene detail information of Glyur008913s00047745 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48540.1 | 2.00E-75 | receptor-like protein kinase-related family protein |
| NR | XP_004492208.1 | 2.21E-157 | PREDICTED: cysteine-rich repeat secretory protein 55-like [Cicer arietinum] |
| Swissprot | tr|Q9LV60|CRR55_ARATH | 1.00E-103 | Cysteine-rich repeat secretory protein 55 (Precursor) |
| trEMBL | tr|G7KY09|G7KY09_MEDTR | 9.00E-151 | Cysteine-rich RLK (Receptor-like kinase) protein {ECO:0000313|EMBL:AES78986.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08913 | 986 | 1777 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008913s00047745.1 | PF01657.12 | Stress-antifung | 27 | 126 | 9.30E-27 |
| Glyur008913s00047745.1 | PF01657.12 | Stress-antifung | 144 | 240 | 5.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.161 |
| SRR1783600 | control | 2.100 |
| SRR1783602 | moderate drought stress | 0.457 |
| SRR1811619 | moderate drought stress | 0.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.833 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.574 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.215 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.149 |
| SRR2868004 | Drought Stress (root) | 5.468 |
| SRR2967015 | Control (root) | 1.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.212 |
| SRR9715740 | Leaf | 0.234 |
| SRR9715741 | Leaf | 2.167 |
| SRR9715739 | Root | 0.301 |
| SRR9715742 | Root | 1.505 |
| SRR9715743 | Root | 1.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.590 |
| SRR8749028 | MeJA induced 9h | 15.597 |
| SRR8749029 | MeJA induced 9h | 13.066 |
| SRR8749030 | Uninduced | 1.179 |
| SRR8749031 | Uninduced | 1.941 |
| SRR8749032 | Uninduced | 0.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.584 |
| SRR8400027 | Control - Root | 1.734 |