Gene detail information of Glyur008911s00046235.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15650.2 | 7.00E-07 | alpha/beta-Hydrolases superfamily protein |
| NR | ACU24196.1 | 9.63E-09 | unknown [Glycine max] |
| trEMBL | tr|C6TMQ4|C6TMQ4_SOYBN | 4.00E-09 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU24196.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08911 | 1312 | 2146 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K06130 | LYPLA2 | EC:3.1.1.5 | Glycerophospholipid metabolism | map00564 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.236 |
| SRR1783600 | control | 0.595 |
| SRR1783602 | moderate drought stress | 0.765 |
| SRR1811619 | moderate drought stress | 0.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.385 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.181 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.826 |
| SRR2868004 | Drought Stress (root) | 0.541 |
| SRR2967015 | Control (root) | 0.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.254 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.134 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.017 |
| SRR9715743 | Root | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.062 |
| SRR8749028 | MeJA induced 9h | 0.134 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.117 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.256 |
| SRR8400027 | Control - Root | 1.938 |