Gene detail information of Glyur008854s00047807 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29250.1 | 6.00E-21 | HXXXD-type acyl-transferase family protein |
| NR | XP_003626431.1 | 1.79E-63 | Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula] |
| Swissprot | tr|Q9LIS1|CR26L_ARATH | 2.00E-12 | Protein ECERIFERUM 26-like |
| trEMBL | tr|G7L1V1|G7L1V1_MEDTR | 7.00E-64 | HXXXD-type acyl-transferase family protein {ECO:0000313|EMBL:AES82649.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08854 | 1070 | 1489 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008854s00047807.1 | PF02458.10 | Transferase | 3 | 140 | 2.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.390 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.184 |
| SRR2868004 | Drought Stress (root) | 2.623 |
| SRR2967015 | Control (root) | 3.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.095 |
| SRR9715740 | Leaf | 0.907 |
| SRR9715741 | Leaf | 1.288 |
| SRR9715739 | Root | 1.218 |
| SRR9715742 | Root | 0.783 |
| SRR9715743 | Root | 1.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.308 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.934 |
| SRR8400027 | Control - Root | 2.790 |