Gene detail information of Glyur008831s00045516 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14240.1 | 2.00E-83 | Thioredoxin superfamily protein |
| NR | XP_003594786.1 | 6.69E-145 | Phosducin-like protein [Medicago truncatula] |
| trEMBL | tr|G7IMU2|G7IMU2_MEDTR | 2.00E-145 | Phosducin-like protein {ECO:0000313|EMBL:AES65037.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08831 | 188 | 2197 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008831s00045516.1 | PF02114.11 | Phosducin | 59 | 183 | 6.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.850 |
| SRR1783600 | control | 32.385 |
| SRR1783602 | moderate drought stress | 27.782 |
| SRR1811619 | moderate drought stress | 27.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.647 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.945 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.822 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.330 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.346 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.519 |
| SRR2868004 | Drought Stress (root) | 45.732 |
| SRR2967015 | Control (root) | 43.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.333 |
| SRR9715740 | Leaf | 15.490 |
| SRR9715741 | Leaf | 16.307 |
| SRR9715739 | Root | 24.849 |
| SRR9715742 | Root | 24.992 |
| SRR9715743 | Root | 23.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.913 |
| SRR8749028 | MeJA induced 9h | 12.488 |
| SRR8749029 | MeJA induced 9h | 8.615 |
| SRR8749030 | Uninduced | 8.259 |
| SRR8749031 | Uninduced | 5.431 |
| SRR8749032 | Uninduced | 5.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.627 |
| SRR8400027 | Control - Root | 39.265 |