Gene detail information of Glyur008707s00044112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16550.1 | 6.00E-23 | |
| NR | XP_004491351.1 | 3.72E-65 | PREDICTED: uncharacterized protein LOC101514323 [Cicer arietinum] |
| trEMBL | tr|G7K3E8|G7K3E8_MEDTR | 1.00E-64 | Uncharacterized protein {ECO:0000313|EMBL:AFK39622.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08707 | 13 | 2352 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.933 |
| SRR1783600 | control | 12.797 |
| SRR1783602 | moderate drought stress | 15.270 |
| SRR1811619 | moderate drought stress | 14.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.443 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.750 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.015 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.703 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.756 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.886 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.151 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.258 |
| SRR2868004 | Drought Stress (root) | 15.457 |
| SRR2967015 | Control (root) | 15.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.047 |
| SRR9715740 | Leaf | 37.708 |
| SRR9715741 | Leaf | 32.988 |
| SRR9715739 | Root | 57.105 |
| SRR9715742 | Root | 32.441 |
| SRR9715743 | Root | 39.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.948 |
| SRR8749028 | MeJA induced 9h | 8.309 |
| SRR8749029 | MeJA induced 9h | 5.811 |
| SRR8749030 | Uninduced | 2.840 |
| SRR8749031 | Uninduced | 0.697 |
| SRR8749032 | Uninduced | 2.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.846 |
| SRR8400027 | Control - Root | 30.415 |