Gene detail information of Glyur008637s00046175 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004495055.1 | 3.77E-35 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cicer arietinum] |
| Swissprot | tr|Q7XJ98|KATAM_ARATH | 2.00E-11 | Xyloglucan galactosyltransferase KATAMARI1 |
| trEMBL | tr|A0A072VKC5|A0A072VKC5_MEDTR | 7.00E-29 | Xyloglucan galactosyltransferase KATAMARI-like protein {ECO:0000313|EMBL:KEH42459.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08637 | 1455 | 2392 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.286 |
| SRR1783600 | control | 21.003 |
| SRR1783602 | moderate drought stress | 18.539 |
| SRR1811619 | moderate drought stress | 17.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.651 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.159 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.963 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.049 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.722 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.013 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.754 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.356 |
| SRR2868004 | Drought Stress (root) | 1.985 |
| SRR2967015 | Control (root) | 2.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.248 |
| SRR9715740 | Leaf | 1.800 |
| SRR9715741 | Leaf | 3.783 |
| SRR9715739 | Root | 6.048 |
| SRR9715742 | Root | 7.526 |
| SRR9715743 | Root | 5.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.920 |
| SRR8749028 | MeJA induced 9h | 9.055 |
| SRR8749029 | MeJA induced 9h | 3.111 |
| SRR8749030 | Uninduced | 2.240 |
| SRR8749031 | Uninduced | 4.351 |
| SRR8749032 | Uninduced | 8.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.721 |
| SRR8400027 | Control - Root | 11.829 |