Gene detail information of Glyur008578s00047828 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21830.1 | 4.00E-11 | |
| NR | XP_004502466.1 | 3.91E-40 | PREDICTED: uncharacterized protein LOC101506327 [Cicer arietinum] |
| trEMBL | tr|G7J4F6|G7J4F6_MEDTR | 2.00E-38 | DUF740 family protein {ECO:0000313|EMBL:AES72279.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08578 | 273 | 605 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.047 |
| SRR1783600 | control | 12.028 |
| SRR1783602 | moderate drought stress | 13.593 |
| SRR1811619 | moderate drought stress | 12.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.221 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.586 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.743 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.314 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.600 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.385 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.047 |
| SRR2868004 | Drought Stress (root) | 17.430 |
| SRR2967015 | Control (root) | 16.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.716 |
| SRR9715740 | Leaf | 91.250 |
| SRR9715741 | Leaf | 73.423 |
| SRR9715739 | Root | 13.172 |
| SRR9715742 | Root | 33.229 |
| SRR9715743 | Root | 30.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.358 |
| SRR8749028 | MeJA induced 9h | 27.625 |
| SRR8749029 | MeJA induced 9h | 43.980 |
| SRR8749030 | Uninduced | 15.466 |
| SRR8749031 | Uninduced | 1.507 |
| SRR8749032 | Uninduced | 11.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.021 |
| SRR8400027 | Control - Root | 10.726 |