Gene detail information of Glyur008473s00047260 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27220.1 | 3.00E-37 | NB-ARC domain-containing disease resistance protein |
| NR | KEH38455.1 | 0 | disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula] |
| Swissprot | tr|O81825|DRL28_ARATH | 3.00E-51 | Probable disease resistance protein At4g27220 |
| trEMBL | tr|A0A072VJZ9|A0A072VJZ9_MEDTR | 0 | Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313|EMBL:KEH38455.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08473 | 439 | 2384 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008473s00047260.1 | PF00931.17 | NB-ARC | 4 | 122 | 7.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.582 |
| SRR1783600 | control | 5.470 |
| SRR1783602 | moderate drought stress | 13.550 |
| SRR1811619 | moderate drought stress | 13.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.329 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.310 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.651 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.048 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.713 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.503 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.472 |
| SRR2868004 | Drought Stress (root) | 8.774 |
| SRR2967015 | Control (root) | 8.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.189 |
| SRR9715740 | Leaf | 0.033 |
| SRR9715741 | Leaf | 1.209 |
| SRR9715739 | Root | 0.109 |
| SRR9715742 | Root | 1.544 |
| SRR9715743 | Root | 1.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.499 |
| SRR8749028 | MeJA induced 9h | 2.799 |
| SRR8749029 | MeJA induced 9h | 0.371 |
| SRR8749030 | Uninduced | 0.653 |
| SRR8749031 | Uninduced | 0.344 |
| SRR8749032 | Uninduced | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.511 |
| SRR8400027 | Control - Root | 12.923 |