Gene detail information of Glyur008385s00046185 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21700.3 | 4.00E-35 | Ras-related small GTP-binding family protein |
| NR | XP_004515072.1 | 6.51E-101 | PREDICTED: septum-promoting GTP-binding protein 1-like [Cicer arietinum] |
| trEMBL | tr|G7JDG8|G7JDG8_MEDTR | 1.00E-94 | Septum-promoting GTP-binding-like protein {ECO:0000313|EMBL:AES88100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08385 | 89 | 1146 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008385s00046185.1 | PF08477.8 | Miro | 92 | 179 | 3.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.515 |
| SRR1783600 | control | 0.481 |
| SRR1783602 | moderate drought stress | 2.511 |
| SRR1811619 | moderate drought stress | 2.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.796 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.234 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.346 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.027 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.469 |
| SRR2868004 | Drought Stress (root) | 0.925 |
| SRR2967015 | Control (root) | 0.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.707 |
| SRR9715740 | Leaf | 1.360 |
| SRR9715741 | Leaf | 1.664 |
| SRR9715739 | Root | 0.305 |
| SRR9715742 | Root | 2.344 |
| SRR9715743 | Root | 2.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.087 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.199 |
| SRR8400027 | Control - Root | 4.507 |