Gene detail information of Glyur008367s00046258 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003610657.1 | 3.62E-88 | TIR-NBS-LRR type disease resistance protein [Medicago truncatula] |
| trEMBL | tr|G7K107|G7K107_MEDTR | 1.00E-88 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AES93615.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08367 | 181 | 1585 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.220 |
| SRR1783600 | control | 7.232 |
| SRR1783602 | moderate drought stress | 3.918 |
| SRR1811619 | moderate drought stress | 3.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.060 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.885 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 56.556 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 53.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.301 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.803 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.686 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.486 |
| SRR2868004 | Drought Stress (root) | 11.971 |
| SRR2967015 | Control (root) | 8.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.012 |
| SRR9715740 | Leaf | 12.846 |
| SRR9715741 | Leaf | 18.190 |
| SRR9715739 | Root | 1.630 |
| SRR9715742 | Root | 4.261 |
| SRR9715743 | Root | 3.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.881 |
| SRR8749028 | MeJA induced 9h | 5.034 |
| SRR8749029 | MeJA induced 9h | 2.523 |
| SRR8749030 | Uninduced | 4.231 |
| SRR8749031 | Uninduced | 6.974 |
| SRR8749032 | Uninduced | 4.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.563 |
| SRR8400027 | Control - Root | 12.050 |