Gene detail information of Glyur008363s00046213 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52110.2 | 2.00E-26 | Protein of unknown function (DUF2930) |
| NR | XP_004512623.1 | 6.21E-62 | PREDICTED: uncharacterized protein LOC101503589 isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1MQ18|I1MQ18_SOYBN | 3.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G32270.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08363 | 71 | 2251 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008363s00046213.1 | PF11152.3 | DUF2930 | 28 | 142 | 3.00E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.175 |
| SRR1783600 | control | 4.761 |
| SRR1783602 | moderate drought stress | 5.452 |
| SRR1811619 | moderate drought stress | 5.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.078 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.064 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.362 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.650 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.663 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.952 |
| SRR2868004 | Drought Stress (root) | 2.877 |
| SRR2967015 | Control (root) | 3.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.386 |
| SRR9715740 | Leaf | 15.503 |
| SRR9715741 | Leaf | 12.505 |
| SRR9715739 | Root | 2.972 |
| SRR9715742 | Root | 4.335 |
| SRR9715743 | Root | 4.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.525 |
| SRR8749028 | MeJA induced 9h | 2.448 |
| SRR8749029 | MeJA induced 9h | 2.493 |
| SRR8749030 | Uninduced | 0.868 |
| SRR8749031 | Uninduced | 0.516 |
| SRR8749032 | Uninduced | 0.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.835 |
| SRR8400027 | Control - Root | 11.457 |