Gene detail information of Glyur008334s00046696 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN00315.1 | 7.80E-18 | Squamosa promoter-binding-like protein 12 [Glycine soja] |
| trEMBL | tr|K7LGS5|K7LGS5_SOYBN | 3.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G01211.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08334 | 583 | 2063 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.242 |
| SRR1783600 | control | 5.941 |
| SRR1783602 | moderate drought stress | 7.842 |
| SRR1811619 | moderate drought stress | 7.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.245 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.649 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.449 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.994 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.539 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.119 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.866 |
| SRR2868004 | Drought Stress (root) | 7.696 |
| SRR2967015 | Control (root) | 7.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.678 |
| SRR9715740 | Leaf | 8.607 |
| SRR9715741 | Leaf | 9.219 |
| SRR9715739 | Root | 5.942 |
| SRR9715742 | Root | 8.939 |
| SRR9715743 | Root | 4.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.064 |
| SRR8749028 | MeJA induced 9h | 3.061 |
| SRR8749029 | MeJA induced 9h | 4.452 |
| SRR8749030 | Uninduced | 4.201 |
| SRR8749031 | Uninduced | 2.488 |
| SRR8749032 | Uninduced | 1.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.993 |
| SRR8400027 | Control - Root | 12.033 |