Gene detail

Gene detail information of Glyur008231s00044969

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16060.1	9.00E-155	ATP binding microtubule motor family protein
NR	KHN45648.1	0	Kinesin-related protein 6 [Glycine soja]
Swissprot	tr\|Q940B8\|KIN13_ARATH	6.00E-124	Kinesin-13A
trEMBL	tr\|I1L4I0\|I1L4I0_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur008231s00044969.1
GTAGTGGGAAGACGTATACTATGCAACCATTGCCTCTCAAAGCCTCCCAAGATATTTTAAGATTAATGCACCACACATACTGGAACCAAGGTTTCCAATTGTATGTTAGTTTCTTCGAAATATATGGGGGAAAACTATTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAGCAACAGGTTTGTATTGTTGGCTTGCAAGAATACAAAGTATCTAAAGTTGAAACAATCAAGGAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGCACAACTGGTGCAAATGAGGAATCCTCTCGGTCACACGCTATACTTCAGCTTTGTATCAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGAATTATAGGCAAACTATCTTTTATAGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATTAGAGCGCTAGACAATGACCAAGGGCATATCCCTTTTAGAGGAAGTAAATTAACTGAAGTTCTGCGAGACTCTTTTGTTGGTGATTCACGGACTGTAATGATATCATGCATTTCGCCAAGCTCAGGGTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAAGGAAACAGCTCCAGAAGGGATCCCCCTTCTTCCTCAAACCTTAGAGACTCAACTGTATTGCCAGTTCATGATGATACCTTTGAGGATGAAATAACATATGTTTCCAGTGAGAGGAATCAATTTGGATGGTCCAAACAGCCTGAAAGAGAACCGTCTCCTCCAAATAATTTGGATCGTATTCCAAGTGGTAGGATGGGGGGAAATTTGGCACCACCTTTTTATCTTGACCAACAAAAGGGTCAAAGAGGTTTTCAAAATGATAGAATTGTAAATGAAAATGATTACCTAGGACCAACATATGGACAAGTCAGAACAAGAAAAACAGGCAAGAGGGTGGATAACATCCAGTTATCTGCTGTGGAGGACAAAAGGAAGATAGAATCCCGTGTTAAACATGTAGATTTATCACATGTTGTGAGCAAACATTCTGATCCTGATGATGATTTAAATGCCCTGCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACAGGAGACAAGTGGAGGAAACAATAGACATTGTTAGGGTGGAGATGAATTTACTCGTTGAAGCTGACCAACCGGGAAATCAACTGGATGATTATATTTCCAAATTGAATACCATTTTGTCACAAAAAGCTGCAGGAATCTTTCAATTGCAGACGCAGTTGGCTCAGTTTCAGAGACGCCTAAACGAGTATAATGTTTTCGTATCTTCTGGTAAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold08231	464	2407	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur008231s00044969.1	PF00225.18	Kinesin	10	224	1.20E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.027
SRR1783600	control	7.079
SRR1783602	moderate drought stress	7.278
SRR1811619	moderate drought stress	7.009

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.273
DRR006520	Root Summer glycyrrhizin high producing strain	9.308
DRR006521	Root Winter glycyrrhizin high producing strain	5.963
DRR006522	Root Winter glycyrrhizin high producing strain	5.603
DRR006523	Root Summer glycyrrhizin low producing strain	6.430
DRR006524	Root Summer glycyrrhizin low producing strain	6.871
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.111
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.145

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.461
SRR2868004	Drought Stress (root)	9.170
SRR2967015	Control (root)	8.905

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.740
SRR9715740	Leaf	2.384
SRR9715741	Leaf	4.334
SRR9715739	Root	0.811
SRR9715742	Root	6.228
SRR9715743	Root	4.523

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.175
SRR8749028	MeJA induced 9h	7.038
SRR8749029	MeJA induced 9h	6.220
SRR8749030	Uninduced	2.602
SRR8749031	Uninduced	2.889
SRR8749032	Uninduced	2.479

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.149
SRR8400027	Control - Root	10.586