Gene detail information of Glyur008161s00047898 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003591277.1 | 3.69E-47 | hypothetical protein MTR_1g085190 [Medicago truncatula] |
| trEMBL | tr|G7IAE7|G7IAE7_MEDTR | 1.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AES61528.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08161 | 1228 | 1542 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.828 |
| SRR1783600 | control | 16.965 |
| SRR1783602 | moderate drought stress | 18.200 |
| SRR1811619 | moderate drought stress | 18.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.563 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.431 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.202 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.371 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 67.510 |
| SRR2868004 | Drought Stress (root) | 43.047 |
| SRR2967015 | Control (root) | 41.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.203 |
| SRR9715740 | Leaf | 1.073 |
| SRR9715741 | Leaf | 0.175 |
| SRR9715739 | Root | 27.648 |
| SRR9715742 | Root | 15.734 |
| SRR9715743 | Root | 15.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.284 |
| SRR8749028 | MeJA induced 9h | 0.133 |
| SRR8749029 | MeJA induced 9h | 2.732 |
| SRR8749030 | Uninduced | 1.077 |
| SRR8749031 | Uninduced | 0.197 |
| SRR8749032 | Uninduced | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.758 |
| SRR8400027 | Control - Root | 66.436 |