Gene detail information of Glyur008121s00045809 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24020.2 | 2.00E-05 | MLP-like protein 423 |
| NR | CAB61739.1 | 2.84E-52 | putative ABA-responsive protein [Cicer arietinum] |
| Swissprot | tr|P52779|L18B_LUPLU | 9.00E-51 | Protein LlR18B |
| trEMBL | tr|Q9SMK8|Q9SMK8_CICAR | 1.00E-52 | Putative ABA-responsive protein {ECO:0000313|EMBL:CAB61739.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08121 | 3 | 3005 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008121s00045809.1 | PF00407.14 | Bet_v_1 | 1 | 112 | 5.30E-16 |
| Glyur008121s00045809.1 | PF00407.14 | Bet_v_1 | 121 | 183 | 7.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 68.292 |
| SRR1783600 | control | 111.256 |
| SRR1783602 | moderate drought stress | 161.710 |
| SRR1811619 | moderate drought stress | 161.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 139.928 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 145.021 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 864.567 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 873.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 102.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 107.948 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.029 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 239.880 |
| SRR2868004 | Drought Stress (root) | 439.010 |
| SRR2967015 | Control (root) | 584.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 89.509 |
| SRR9715740 | Leaf | 127.597 |
| SRR9715741 | Leaf | 208.913 |
| SRR9715739 | Root | 621.680 |
| SRR9715742 | Root | 503.255 |
| SRR9715743 | Root | 514.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 208.906 |
| SRR8749028 | MeJA induced 9h | 371.469 |
| SRR8749029 | MeJA induced 9h | 233.255 |
| SRR8749030 | Uninduced | 207.870 |
| SRR8749031 | Uninduced | 60.832 |
| SRR8749032 | Uninduced | 183.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 150.220 |
| SRR8400027 | Control - Root | 134.926 |