Gene detail information of Glyur008072s00046941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN09907.1 | 4.27E-44 | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Glycine soja] |
| trEMBL | tr|K7K1I9|K7K1I9_SOYBN | 1.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G03956.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08072 | 2099 | 2955 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.352 |
| SRR1783600 | control | 9.439 |
| SRR1783602 | moderate drought stress | 14.897 |
| SRR1811619 | moderate drought stress | 15.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.767 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.965 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.345 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.057 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.101 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.106 |
| SRR2868004 | Drought Stress (root) | 0.143 |
| SRR2967015 | Control (root) | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.424 |
| SRR9715740 | Leaf | 5.833 |
| SRR9715741 | Leaf | 20.018 |
| SRR9715739 | Root | 2.700 |
| SRR9715742 | Root | 21.868 |
| SRR9715743 | Root | 17.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.166 |
| SRR8749028 | MeJA induced 9h | 0.080 |
| SRR8749029 | MeJA induced 9h | 0.070 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.982 |
| SRR8400027 | Control - Root | 12.773 |