Gene detail information of Glyur008024s00046272.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66540.1 | 9.00E-68 | Cytochrome P450 superfamily protein |
| NR | XP_006590769.1 | 9.64E-113 | PREDICTED: cytochrome P450 81D1-like [Glycine max] |
| COG | YP_001545288.1 | 6.00E-28 | cytochrome P450 [Herpetosiphon aurantiacus DSM 785] |
| Swissprot | tr|Q9FG65|C81D1_ARATH | 2.00E-73 | Cytochrome P450 81D1 |
| trEMBL | tr|I1LIJ5|I1LIJ5_SOYBN | 5.00E-113 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G09880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08024 | 311 | 2707 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP81D10P |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur008024s00046272.1 | PF00067.17 | p450 | 2 | 190 | 4.70E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.821 |
| SRR1783600 | control | 2.827 |
| SRR1783602 | moderate drought stress | 5.519 |
| SRR1811619 | moderate drought stress | 5.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.146 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.957 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.939 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.388 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.433 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.457 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.732 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.292 |
| SRR2868004 | Drought Stress (root) | 11.424 |
| SRR2967015 | Control (root) | 16.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.031 |
| SRR9715740 | Leaf | 2.100 |
| SRR9715741 | Leaf | 1.169 |
| SRR9715739 | Root | 7.728 |
| SRR9715742 | Root | 7.433 |
| SRR9715743 | Root | 6.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.377 |
| SRR8749028 | MeJA induced 9h | 4.033 |
| SRR8749029 | MeJA induced 9h | 0.707 |
| SRR8749030 | Uninduced | 21.162 |
| SRR8749031 | Uninduced | 7.028 |
| SRR8749032 | Uninduced | 4.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.833 |
| SRR8400027 | Control - Root | 7.368 |