Gene detail information of Glyur008016s00045786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29940.1 | 2.00E-18 | pleiotropic drug resistance 3 |
| NR | KHN40066.1 | 8.72E-48 | ABC transporter G family member 31 [Glycine soja] |
| Swissprot | tr|Q8S628|PDR13_ORYSJ | 3.00E-33 | Pleiotropic drug resistance protein 13 |
| trEMBL | tr|K7M810|K7M810_SOYBN | 5.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold08016 | 1790 | 2757 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.623 |
| SRR1783600 | control | 0.298 |
| SRR1783602 | moderate drought stress | 0.067 |
| SRR1811619 | moderate drought stress | 0.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.463 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.278 |
| SRR2868004 | Drought Stress (root) | 0.894 |
| SRR2967015 | Control (root) | 0.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.270 |
| SRR9715740 | Leaf | 16.376 |
| SRR9715741 | Leaf | 4.573 |
| SRR9715739 | Root | 1.953 |
| SRR9715742 | Root | 3.633 |
| SRR9715743 | Root | 2.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.281 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.079 |
| SRR8400027 | Control - Root | 4.755 |