Gene detail information of Glyur007933s00045729 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17020.2 | 8.00E-08 | exportin 1A |
| NR | XP_006376109.1 | 5.48E-07 | hypothetical protein POPTR_0013s09680g [Populus trichocarpa] |
| trEMBL | tr|U5FVD1|U5FVD1_POPTR | 2.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:ERP53906.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07933 | 1046 | 3344 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.818 |
| SRR1783600 | control | 17.382 |
| SRR1783602 | moderate drought stress | 71.054 |
| SRR1811619 | moderate drought stress | 62.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 105.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 107.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 155.399 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 150.811 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.249 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 87.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 89.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 75.938 |
| SRR2868004 | Drought Stress (root) | 108.885 |
| SRR2967015 | Control (root) | 97.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 67.476 |
| SRR9715740 | Leaf | 38.804 |
| SRR9715741 | Leaf | 72.865 |
| SRR9715739 | Root | 18.205 |
| SRR9715742 | Root | 34.048 |
| SRR9715743 | Root | 28.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.038 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 95.120 |
| SRR8400027 | Control - Root | 111.057 |