Gene detail information of Glyur007916s00047425 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24860.1 | 2.00E-31 | flowering promoting factor 1 |
| NR | XP_006600348.1 | 1.63E-60 | PREDICTED: flowering-promoting factor 1-like protein 3-like [Glycine max] |
| Swissprot | tr|Q0E1D7|FLP3_ORYSJ | 8.00E-49 | Flowering-promoting factor 1-like protein 3 |
| trEMBL | tr|I1MRH5|I1MRH5_SOYBN | 6.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G02860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07916 | 2468 | 2809 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.429 |
| SRR1783600 | control | 24.644 |
| SRR1783602 | moderate drought stress | 14.978 |
| SRR1811619 | moderate drought stress | 14.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.007 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.435 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.832 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.888 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.850 |
| SRR2868004 | Drought Stress (root) | 18.702 |
| SRR2967015 | Control (root) | 25.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.193 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 19.803 |
| SRR9715742 | Root | 26.205 |
| SRR9715743 | Root | 20.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.272 |
| SRR8749029 | MeJA induced 9h | 0.771 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.628 |
| SRR8400027 | Control - Root | 10.302 |