Gene detail information of Glyur007915s00046811 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44980.1 | 1.00E-16 | SNF2 domain-containing protein / helicase domain-containing protein |
| NR | XP_004492182.1 | 1.53E-27 | PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cicer arietinum] |
| trEMBL | tr|V7B4P4|V7B4P4_PHAVU | 1.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:ESW12774.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07915 | 1910 | 3121 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.773 |
| SRR1783600 | control | 1.258 |
| SRR1783602 | moderate drought stress | 0.244 |
| SRR1811619 | moderate drought stress | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.406 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.822 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.726 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.574 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.394 |
| SRR2868004 | Drought Stress (root) | 2.842 |
| SRR2967015 | Control (root) | 3.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.902 |
| SRR9715740 | Leaf | 0.289 |
| SRR9715741 | Leaf | 0.925 |
| SRR9715739 | Root | 0.487 |
| SRR9715742 | Root | 1.258 |
| SRR9715743 | Root | 1.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.362 |
| SRR8749028 | MeJA induced 9h | 1.566 |
| SRR8749029 | MeJA induced 9h | 0.684 |
| SRR8749030 | Uninduced | 0.226 |
| SRR8749031 | Uninduced | 0.150 |
| SRR8749032 | Uninduced | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.499 |
| SRR8400027 | Control - Root | 3.979 |