Gene detail information of Glyur007894s00044417 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41000.2 | 4.00E-22 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003553835.1 | 2.08E-64 | PREDICTED: chaperone protein dnaJ 72-like [Glycine max] |
| COG | YP_006436015.1 | 5.00E-15 | DnaJ-class molecular chaperone with C-terminal Zn finger domain [Flexibacter litoralis DSM 6794] |
| Swissprot | tr|Q0WTI8|DNJ72_ARATH | 8.00E-27 | Chaperone protein dnaJ 72 |
| trEMBL | tr|I1N762|I1N762_SOYBN | 8.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G15580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07894 | 32 | 2654 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur007894s00044417.1 | PF00226.26 | DnaJ | 2 | 68 | 6.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.259 |
| SRR1783600 | control | 2.434 |
| SRR1783602 | moderate drought stress | 2.953 |
| SRR1811619 | moderate drought stress | 2.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.529 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.808 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.152 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.638 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.232 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.020 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.125 |
| SRR2868004 | Drought Stress (root) | 4.871 |
| SRR2967015 | Control (root) | 5.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.124 |
| SRR9715740 | Leaf | 3.350 |
| SRR9715741 | Leaf | 2.843 |
| SRR9715739 | Root | 0.270 |
| SRR9715742 | Root | 1.146 |
| SRR9715743 | Root | 1.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.509 |
| SRR8749028 | MeJA induced 9h | 4.012 |
| SRR8749029 | MeJA induced 9h | 2.253 |
| SRR8749030 | Uninduced | 2.634 |
| SRR8749031 | Uninduced | 1.198 |
| SRR8749032 | Uninduced | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.593 |
| SRR8400027 | Control - Root | 3.878 |