Gene detail information of Glyur007885s00047640 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004499958.1 | 1.30E-16 | PREDICTED: uncharacterized protein LOC101490170 [Cicer arietinum] |
| trEMBL | tr|A0A072UAG3|A0A072UAG3_MEDTR | 5.00E-13 | Oxidoreductase/transition metal ion-binding protein, putative {ECO:0000313|EMBL:KEH26396.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07885 | 660 | 947 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.059 |
| SRR1783600 | control | 9.207 |
| SRR1783602 | moderate drought stress | 10.280 |
| SRR1811619 | moderate drought stress | 9.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.309 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.273 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.951 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.609 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.396 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.899 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.041 |
| SRR2868004 | Drought Stress (root) | 11.839 |
| SRR2967015 | Control (root) | 9.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.423 |
| SRR9715740 | Leaf | 3.485 |
| SRR9715741 | Leaf | 6.306 |
| SRR9715739 | Root | 0.406 |
| SRR9715742 | Root | 5.026 |
| SRR9715743 | Root | 3.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.283 |
| SRR8749028 | MeJA induced 9h | 7.501 |
| SRR8749029 | MeJA induced 9h | 1.317 |
| SRR8749030 | Uninduced | 0.609 |
| SRR8749031 | Uninduced | 1.735 |
| SRR8749032 | Uninduced | 0.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.025 |
| SRR8400027 | Control - Root | 19.195 |