Gene detail information of Glyur007866s00045887 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54000.3 | 4.00E-07 | |
| NR | XP_007140452.1 | 2.01E-148 | hypothetical protein PHAVU_008G113400g [Phaseolus vulgaris] |
| trEMBL | tr|V7B7J8|V7B7J8_PHAVU | 8.00E-149 | Uncharacterized protein {ECO:0000313|EMBL:ESW12446.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold07866 | 1609 | 3474 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.483 |
| SRR1783600 | control | 24.328 |
| SRR1783602 | moderate drought stress | 16.010 |
| SRR1811619 | moderate drought stress | 16.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.764 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.172 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.488 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.506 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.976 |
| SRR2868004 | Drought Stress (root) | 19.718 |
| SRR2967015 | Control (root) | 27.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.186 |
| SRR9715740 | Leaf | 7.299 |
| SRR9715741 | Leaf | 8.805 |
| SRR9715739 | Root | 17.814 |
| SRR9715742 | Root | 51.510 |
| SRR9715743 | Root | 41.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 121.635 |
| SRR8749028 | MeJA induced 9h | 56.222 |
| SRR8749029 | MeJA induced 9h | 27.764 |
| SRR8749030 | Uninduced | 10.600 |
| SRR8749031 | Uninduced | 0.605 |
| SRR8749032 | Uninduced | 2.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.253 |
| SRR8400027 | Control - Root | 35.365 |